Cluster: Rep_2060_CGC58
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_30 | Rep_2060_c_30_37 | 40420 | 42465 | - | GH151 |
| TC | Rep_2060_c_30 | Rep_2060_c_30_38 | 42491 | 43318 | - | 3.A.1.1.28 |
| TC | Rep_2060_c_30 | Rep_2060_c_30_39 | 43318 | 44208 | - | 3.A.1.1.42 |
| TC | Rep_2060_c_30 | Rep_2060_c_30_40 | 44225 | 45592 | - | 3.A.1.1.44 |
| TF | Rep_2060_c_30 | Rep_2060_c_30_41 | 45673 | 47262 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2060_c_30 | Rep_2060_c_30_42 | 47252 | 49048 | - | 8.A.59.2.1 |
Gene ID: Rep_2060_c_30_37
Type: CAZyme
Location: 40420 - 42465 (-)
Type: CAZyme
Location: 40420 - 42465 (-)
Gene ID: Rep_2060_c_30_38
Type: TC
Location: 42491 - 43318 (-)
Type: TC
Location: 42491 - 43318 (-)
Gene ID: Rep_2060_c_30_39
Type: TC
Location: 43318 - 44208 (-)
Type: TC
Location: 43318 - 44208 (-)
Gene ID: Rep_2060_c_30_40
Type: TC
Location: 44225 - 45592 (-)
Type: TC
Location: 44225 - 45592 (-)
Gene ID: Rep_2060_c_30_41
Type: TF
Location: 45673 - 47262 (-)
Type: TF
Location: 45673 - 47262 (-)
Gene ID: Rep_2060_c_30_42
Type: TC
Location: 47252 - 49048 (-)
Type: TC
Location: 47252 - 49048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.