Cluster: Rep_2060_CGC57
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_29 | Rep_2060_c_29_7 | 12849 | 14183 | + | 3.A.1.1.40 |
| TC | Rep_2060_c_29 | Rep_2060_c_29_8 | 14269 | 15171 | + | 3.A.1.1.37 |
| TC | Rep_2060_c_29 | Rep_2060_c_29_9 | 15171 | 16007 | + | 3.A.1.1.41 |
| pfam | Rep_2060_c_29 | Rep_2060_c_29_10 | 16004 | 17005 | + | Hydrolase | HAD_2 |
| CAZyme | Rep_2060_c_29 | Rep_2060_c_29_11 | 17022 | 19850 | + | GH38 |
| pfam | Rep_2060_c_29 | Rep_2060_c_29_12 | 19997 | 20941 | + | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | Rep_2060_c_29 | Rep_2060_c_29_13 | 21190 | 25614 | + | CBM32 | CBM32 | GH95 |
Gene ID: Rep_2060_c_29_7
Type: TC
Location: 12849 - 14183 (+)
Type: TC
Location: 12849 - 14183 (+)
Gene ID: Rep_2060_c_29_8
Type: TC
Location: 14269 - 15171 (+)
Type: TC
Location: 14269 - 15171 (+)
Gene ID: Rep_2060_c_29_9
Type: TC
Location: 15171 - 16007 (+)
Type: TC
Location: 15171 - 16007 (+)
Gene ID: Rep_2060_c_29_10
Type: pfam
Location: 16004 - 17005 (+)
Type: pfam
Location: 16004 - 17005 (+)
Gene ID: Rep_2060_c_29_11
Type: CAZyme
Location: 17022 - 19850 (+)
Type: CAZyme
Location: 17022 - 19850 (+)
Gene ID: Rep_2060_c_29_12
Type: pfam
Location: 19997 - 20941 (+)
Type: pfam
Location: 19997 - 20941 (+)
Gene ID: Rep_2060_c_29_13
Type: CAZyme
Location: 21190 - 25614 (+)
Type: CAZyme
Location: 21190 - 25614 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.