Cluster: Rep_2060_CGC48
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_00424
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_21 | Rep_2060_c_21_1 | 1 | 504 | + | 3.A.1.5.36 |
| NULL(UNKNOWN) | Rep_2060_c_21 | Rep_2060_c_21_2 | 501 | 1151 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_2060_c_21 | Rep_2060_c_21_3 | 1268 | 2218 | - | S09.UPW |
| CAZyme | Rep_2060_c_21 | Rep_2060_c_21_4 | 2215 | 3309 | - | GT2 |
| TC | Rep_2060_c_21 | Rep_2060_c_21_5 | 3390 | 3734 | - | 2.A.7.33.5 |
Gene ID: Rep_2060_c_21_1
Type: TC
Location: 1 - 504 (+)
Type: TC
Location: 1 - 504 (+)
Gene ID: Rep_2060_c_21_2
Type:
Location: 501 - 1151 (+)
Type:
Location: 501 - 1151 (+)
Gene ID: Rep_2060_c_21_3
Type: peptidase
Location: 1268 - 2218 (-)
Type: peptidase
Location: 1268 - 2218 (-)
Gene ID: Rep_2060_c_21_4
Type: CAZyme
Location: 2215 - 3309 (-)
Type: CAZyme
Location: 2215 - 3309 (-)
Gene ID: Rep_2060_c_21_5
Type: TC
Location: 3390 - 3734 (-)
Type: TC
Location: 3390 - 3734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.