Cluster: Rep_2060_CGC43
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_18 | Rep_2060_c_18_49 | 66659 | 67594 | + | 3.A.1.1.10 |
| TC | Rep_2060_c_18 | Rep_2060_c_18_50 | 67607 | 68515 | + | 3.A.1.1.29 |
| pfam | Rep_2060_c_18 | Rep_2060_c_18_51 | 68659 | 71298 | + | Transglut_core |
| CAZyme | Rep_2060_c_18 | Rep_2060_c_18_52 | 71295 | 72620 | + | GH29 |
Gene ID: Rep_2060_c_18_49
Type: TC
Location: 66659 - 67594 (+)
Type: TC
Location: 66659 - 67594 (+)
Gene ID: Rep_2060_c_18_50
Type: TC
Location: 67607 - 68515 (+)
Type: TC
Location: 67607 - 68515 (+)
Gene ID: Rep_2060_c_18_51
Type: pfam
Location: 68659 - 71298 (+)
Type: pfam
Location: 68659 - 71298 (+)
Gene ID: Rep_2060_c_18_52
Type: CAZyme
Location: 71295 - 72620 (+)
Type: CAZyme
Location: 71295 - 72620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.