Cluster: Rep_2060_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_17 | Rep_2060_c_17_38 | 55902 | 57716 | - | 8.A.59.2.1 |
| STP | Rep_2060_c_17 | Rep_2060_c_17_39 | 57928 | 59370 | + | SBP_bac_1 |
| TC | Rep_2060_c_17 | Rep_2060_c_17_40 | 59460 | 60338 | + | 3.A.1.1.7 |
| TC | Rep_2060_c_17 | Rep_2060_c_17_41 | 60338 | 61156 | + | 3.A.1.1.45 |
| CAZyme | Rep_2060_c_17 | Rep_2060_c_17_42 | 61332 | 63557 | + | GH95 |
Gene ID: Rep_2060_c_17_38
Type: TC
Location: 55902 - 57716 (-)
Type: TC
Location: 55902 - 57716 (-)
Gene ID: Rep_2060_c_17_39
Type: STP
Location: 57928 - 59370 (+)
Type: STP
Location: 57928 - 59370 (+)
Gene ID: Rep_2060_c_17_40
Type: TC
Location: 59460 - 60338 (+)
Type: TC
Location: 59460 - 60338 (+)
Gene ID: Rep_2060_c_17_41
Type: TC
Location: 60338 - 61156 (+)
Type: TC
Location: 60338 - 61156 (+)
Gene ID: Rep_2060_c_17_42
Type: CAZyme
Location: 61332 - 63557 (+)
Type: CAZyme
Location: 61332 - 63557 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.