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Cluster: Rep_2060_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2060_c_16 Rep_2060_c_16_24 25433 26197 - 3.A.1.124.2
TC Rep_2060_c_16 Rep_2060_c_16_25 26194 26898 - 3.A.1.124.6
CAZyme Rep_2060_c_16 Rep_2060_c_16_26 27100 30174 - GH2
TC Rep_2060_c_16 Rep_2060_c_16_27 30219 31979 - 8.A.59.2.1
TF Rep_2060_c_16 Rep_2060_c_16_28 31987 33516 - HTH_AraC
TC Rep_2060_c_16 Rep_2060_c_16_29 33681 34523 - 3.A.1.1.4
TC Rep_2060_c_16 Rep_2060_c_16_30 34520 35386 - 3.A.1.1.4
TC Rep_2060_c_16 Rep_2060_c_16_31 35449 36858 - 3.A.1.1.4
CAZyme Rep_2060_c_16 Rep_2060_c_16_32 37044 41615 - GH30
Gene ID: Rep_2060_c_16_24
Type: TC
Location: 25433 - 26197 (-)
Gene ID: Rep_2060_c_16_25
Type: TC
Location: 26194 - 26898 (-)
Gene ID: Rep_2060_c_16_26
Type: CAZyme
Location: 27100 - 30174 (-)
Gene ID: Rep_2060_c_16_27
Type: TC
Location: 30219 - 31979 (-)
Gene ID: Rep_2060_c_16_28
Type: TF
Location: 31987 - 33516 (-)
Gene ID: Rep_2060_c_16_29
Type: TC
Location: 33681 - 34523 (-)
Gene ID: Rep_2060_c_16_30
Type: TC
Location: 34520 - 35386 (-)
Gene ID: Rep_2060_c_16_31
Type: TC
Location: 35449 - 36858 (-)
Gene ID: Rep_2060_c_16_32
Type: CAZyme
Location: 37044 - 41615 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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