Cluster: Rep_2060_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_00907
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_15 | Rep_2060_c_15_73 | 72332 | 74119 | - | GH78 |
| TC | Rep_2060_c_15 | Rep_2060_c_15_74 | 74159 | 74992 | - | 3.A.1.1.34 |
| TC | Rep_2060_c_15 | Rep_2060_c_15_75 | 74994 | 75836 | - | 3.A.1.1.20 |
| TC | Rep_2060_c_15 | Rep_2060_c_15_76 | 75906 | 77204 | - | 3.A.1.1.44 |
| TF | Rep_2060_c_15 | Rep_2060_c_15_77 | 77339 | 78895 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2060_c_15 | Rep_2060_c_15_78 | 78882 | 80678 | - | 9.B.33.1.1 |
Gene ID: Rep_2060_c_15_73
Type: CAZyme
Location: 72332 - 74119 (-)
Type: CAZyme
Location: 72332 - 74119 (-)
Gene ID: Rep_2060_c_15_74
Type: TC
Location: 74159 - 74992 (-)
Type: TC
Location: 74159 - 74992 (-)
Gene ID: Rep_2060_c_15_75
Type: TC
Location: 74994 - 75836 (-)
Type: TC
Location: 74994 - 75836 (-)
Gene ID: Rep_2060_c_15_76
Type: TC
Location: 75906 - 77204 (-)
Type: TC
Location: 75906 - 77204 (-)
Gene ID: Rep_2060_c_15_77
Type: TF
Location: 77339 - 78895 (-)
Type: TF
Location: 77339 - 78895 (-)
Gene ID: Rep_2060_c_15_78
Type: TC
Location: 78882 - 80678 (-)
Type: TC
Location: 78882 - 80678 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.