Cluster: Rep_2060_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_13 | Rep_2060_c_13_32 | 37513 | 38397 | - | 3.A.1.1.18 |
| TC | Rep_2060_c_13 | Rep_2060_c_13_33 | 38408 | 39289 | - | 3.A.1.1.32 |
| STP | Rep_2060_c_13 | Rep_2060_c_13_34 | 39400 | 40854 | - | SBP_bac_1 |
| TC | Rep_2060_c_13 | Rep_2060_c_13_35 | 41024 | 42880 | - | 8.A.59.2.1 |
| pfam | Rep_2060_c_13 | Rep_2060_c_13_36 | 43157 | 44599 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | Rep_2060_c_13 | Rep_2060_c_13_37 | 44621 | 47014 | - | GH94 |
Gene ID: Rep_2060_c_13_32
Type: TC
Location: 37513 - 38397 (-)
Type: TC
Location: 37513 - 38397 (-)
Gene ID: Rep_2060_c_13_33
Type: TC
Location: 38408 - 39289 (-)
Type: TC
Location: 38408 - 39289 (-)
Gene ID: Rep_2060_c_13_34
Type: STP
Location: 39400 - 40854 (-)
Type: STP
Location: 39400 - 40854 (-)
Gene ID: Rep_2060_c_13_35
Type: TC
Location: 41024 - 42880 (-)
Type: TC
Location: 41024 - 42880 (-)
Gene ID: Rep_2060_c_13_36
Type: pfam
Location: 43157 - 44599 (-)
Type: pfam
Location: 43157 - 44599 (-)
Gene ID: Rep_2060_c_13_37
Type: CAZyme
Location: 44621 - 47014 (-)
Type: CAZyme
Location: 44621 - 47014 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.