Cluster: Rep_2060_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_13 | Rep_2060_c_13_23 | 24388 | 26382 | - | GH151 |
| TC | Rep_2060_c_13 | Rep_2060_c_13_24 | 26480 | 27331 | - | 3.A.1.1.18 |
| TC | Rep_2060_c_13 | Rep_2060_c_13_25 | 27342 | 28223 | - | 3.A.1.1.41 |
| STP | Rep_2060_c_13 | Rep_2060_c_13_26 | 28401 | 29804 | - | SBP_bac_1 |
| TC | Rep_2060_c_13 | Rep_2060_c_13_27 | 30041 | 31777 | + | 8.A.59.2.1 |
Gene ID: Rep_2060_c_13_23
Type: CAZyme
Location: 24388 - 26382 (-)
Type: CAZyme
Location: 24388 - 26382 (-)
Gene ID: Rep_2060_c_13_24
Type: TC
Location: 26480 - 27331 (-)
Type: TC
Location: 26480 - 27331 (-)
Gene ID: Rep_2060_c_13_25
Type: TC
Location: 27342 - 28223 (-)
Type: TC
Location: 27342 - 28223 (-)
Gene ID: Rep_2060_c_13_26
Type: STP
Location: 28401 - 29804 (-)
Type: STP
Location: 28401 - 29804 (-)
Gene ID: Rep_2060_c_13_27
Type: TC
Location: 30041 - 31777 (+)
Type: TC
Location: 30041 - 31777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.