Cluster: Rep_2060_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_12 | Rep_2060_c_12_57 | 68081 | 69979 | - | GH13_11 |
| TC | Rep_2060_c_12 | Rep_2060_c_12_58 | 69982 | 71787 | - | 3.A.1.120.6 |
| pfam | Rep_2060_c_12 | Rep_2060_c_12_59 | 71803 | 72558 | - | Exo_endo_phos |
| TC | Rep_2060_c_12 | Rep_2060_c_12_60 | 72807 | 74066 | + | 2.A.49.9.2 |
Gene ID: Rep_2060_c_12_57
Type: CAZyme
Location: 68081 - 69979 (-)
Type: CAZyme
Location: 68081 - 69979 (-)
Gene ID: Rep_2060_c_12_58
Type: TC
Location: 69982 - 71787 (-)
Type: TC
Location: 69982 - 71787 (-)
Gene ID: Rep_2060_c_12_59
Type: pfam
Location: 71803 - 72558 (-)
Type: pfam
Location: 71803 - 72558 (-)
Gene ID: Rep_2060_c_12_60
Type: TC
Location: 72807 - 74066 (+)
Type: TC
Location: 72807 - 74066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.