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Cluster: Rep_2060_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2060_c_9 Rep_2060_c_9_73 79126 80187 - 9.B.34.1.2
pfam Rep_2060_c_9 Rep_2060_c_9_74 80342 81091 - ABC2_membrane | ABC2_membrane_3
TC Rep_2060_c_9 Rep_2060_c_9_75 81085 82041 - 3.A.1.105.1
STP Rep_2060_c_9 Rep_2060_c_9_76 82043 82501 - GyrI-like
TF Rep_2060_c_9 Rep_2060_c_9_77 82498 83382 - 0036286
TC Rep_2060_c_9 Rep_2060_c_9_78 83534 84301 - 3.A.1.122.2
pfam Rep_2060_c_9 Rep_2060_c_9_79 84306 86624 - FtsX | FtsX
STP Rep_2060_c_9 Rep_2060_c_9_80 86599 87309 - TetR_N
CAZyme Rep_2060_c_9 Rep_2060_c_9_81 87553 90006 - GH27
Gene ID: Rep_2060_c_9_73
Type: TC
Location: 79126 - 80187 (-)
Gene ID: Rep_2060_c_9_74
Type: pfam
Location: 80342 - 81091 (-)
Gene ID: Rep_2060_c_9_75
Type: TC
Location: 81085 - 82041 (-)
Gene ID: Rep_2060_c_9_76
Type: STP
Location: 82043 - 82501 (-)
Gene ID: Rep_2060_c_9_77
Type: TF
Location: 82498 - 83382 (-)
Gene ID: Rep_2060_c_9_78
Type: TC
Location: 83534 - 84301 (-)
Gene ID: Rep_2060_c_9_79
Type: pfam
Location: 84306 - 86624 (-)
Gene ID: Rep_2060_c_9_80
Type: STP
Location: 86599 - 87309 (-)
Gene ID: Rep_2060_c_9_81
Type: CAZyme
Location: 87553 - 90006 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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