Cluster: Rep_2060_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_02961
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_9 | Rep_2060_c_9_57 | 59073 | 60779 | - | GH29 |
| TF | Rep_2060_c_9 | Rep_2060_c_9_58 | 60996 | 62054 | - | HTH_AraC |
| TC | Rep_2060_c_9 | Rep_2060_c_9_59 | 62152 | 63942 | - | 8.A.59.2.1 |
| TC | Rep_2060_c_9 | Rep_2060_c_9_60 | 64013 | 64837 | - | 3.A.1.1.41 |
| TC | Rep_2060_c_9 | Rep_2060_c_9_61 | 64851 | 65747 | - | 3.A.1.1.21 |
Gene ID: Rep_2060_c_9_57
Type: CAZyme
Location: 59073 - 60779 (-)
Type: CAZyme
Location: 59073 - 60779 (-)
Gene ID: Rep_2060_c_9_58
Type: TF
Location: 60996 - 62054 (-)
Type: TF
Location: 60996 - 62054 (-)
Gene ID: Rep_2060_c_9_59
Type: TC
Location: 62152 - 63942 (-)
Type: TC
Location: 62152 - 63942 (-)
Gene ID: Rep_2060_c_9_60
Type: TC
Location: 64013 - 64837 (-)
Type: TC
Location: 64013 - 64837 (-)
Gene ID: Rep_2060_c_9_61
Type: TC
Location: 64851 - 65747 (-)
Type: TC
Location: 64851 - 65747 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.