Cluster: Rep_2060_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_7 | Rep_2060_c_7_22 | 28700 | 30235 | - | 9.A.11.1.2 |
| TF | Rep_2060_c_7 | Rep_2060_c_7_23 | 30374 | 31048 | - | GntR |
| pfam | Rep_2060_c_7 | Rep_2060_c_7_24 | 31105 | 31980 | - | GHMP_kinases_N | GHMP_kinases_C |
| CAZyme | Rep_2060_c_7 | Rep_2060_c_7_25 | 32119 | 33687 | - | CBM50 |
Gene ID: Rep_2060_c_7_22
Type: TC
Location: 28700 - 30235 (-)
Type: TC
Location: 28700 - 30235 (-)
Gene ID: Rep_2060_c_7_23
Type: TF
Location: 30374 - 31048 (-)
Type: TF
Location: 30374 - 31048 (-)
Gene ID: Rep_2060_c_7_24
Type: pfam
Location: 31105 - 31980 (-)
Type: pfam
Location: 31105 - 31980 (-)
Gene ID: Rep_2060_c_7_25
Type: CAZyme
Location: 32119 - 33687 (-)
Type: CAZyme
Location: 32119 - 33687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.