Cluster: Rep_2060_CGC136
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_194 | Rep_2060_c_194_2 | 1001 | 1888 | + | 3.A.1.1.20 |
| TC | Rep_2060_c_194 | Rep_2060_c_194_3 | 1900 | 2724 | + | 3.A.1.1.25 |
| CAZyme | Rep_2060_c_194 | Rep_2060_c_194_4 | 2839 | 4857 | + | GH151 |
| TF | Rep_2060_c_194 | Rep_2060_c_194_5 | 4996 | 6018 | + | LacI |
| CAZyme | Rep_2060_c_194 | Rep_2060_c_194_6 | 6033 | 7277 | + | GH29 |
Gene ID: Rep_2060_c_194_2
Type: TC
Location: 1001 - 1888 (+)
Type: TC
Location: 1001 - 1888 (+)
Gene ID: Rep_2060_c_194_3
Type: TC
Location: 1900 - 2724 (+)
Type: TC
Location: 1900 - 2724 (+)
Gene ID: Rep_2060_c_194_4
Type: CAZyme
Location: 2839 - 4857 (+)
Type: CAZyme
Location: 2839 - 4857 (+)
Gene ID: Rep_2060_c_194_5
Type: TF
Location: 4996 - 6018 (+)
Type: TF
Location: 4996 - 6018 (+)
Gene ID: Rep_2060_c_194_6
Type: CAZyme
Location: 6033 - 7277 (+)
Type: CAZyme
Location: 6033 - 7277 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.