Cluster: Rep_2060_CGC129
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_169 | Rep_2060_c_169_2 | 1645 | 2517 | + | 3.A.1.1.36 |
| TC | Rep_2060_c_169 | Rep_2060_c_169_3 | 2527 | 3366 | + | 3.A.1.1.41 |
| pfam | Rep_2060_c_169 | Rep_2060_c_169_4 | 3498 | 5033 | + | Apiosidase | DUF5060 | DUF5605 |
| CAZyme | Rep_2060_c_169 | Rep_2060_c_169_5 | 5320 | 9867 | + | GH51_2 |
Gene ID: Rep_2060_c_169_2
Type: TC
Location: 1645 - 2517 (+)
Type: TC
Location: 1645 - 2517 (+)
Gene ID: Rep_2060_c_169_3
Type: TC
Location: 2527 - 3366 (+)
Type: TC
Location: 2527 - 3366 (+)
Gene ID: Rep_2060_c_169_4
Type: pfam
Location: 3498 - 5033 (+)
Type: pfam
Location: 3498 - 5033 (+)
Gene ID: Rep_2060_c_169_5
Type: CAZyme
Location: 5320 - 9867 (+)
Type: CAZyme
Location: 5320 - 9867 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.