Cluster: Rep_2060_CGC127
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_05367
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_157 | Rep_2060_c_157_2 | 232 | 1761 | - | 3.A.1.2.25 |
| TC | Rep_2060_c_157 | Rep_2060_c_157_3 | 1860 | 2957 | - | 3.A.1.2.14 |
| TF | Rep_2060_c_157 | Rep_2060_c_157_4 | 3126 | 4331 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2060_c_157 | Rep_2060_c_157_5 | 4519 | 10044 | - | GH43_26 |
Gene ID: Rep_2060_c_157_2
Type: TC
Location: 232 - 1761 (-)
Type: TC
Location: 232 - 1761 (-)
Gene ID: Rep_2060_c_157_3
Type: TC
Location: 1860 - 2957 (-)
Type: TC
Location: 1860 - 2957 (-)
Gene ID: Rep_2060_c_157_4
Type: TF
Location: 3126 - 4331 (-)
Type: TF
Location: 3126 - 4331 (-)
Gene ID: Rep_2060_c_157_5
Type: CAZyme
Location: 4519 - 10044 (-)
Type: CAZyme
Location: 4519 - 10044 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.