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Cluster: Rep_2060_CGC120

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2060_c_133 Rep_2060_c_133_5 4805 5641 - 3.A.1.1.41
TC Rep_2060_c_133 Rep_2060_c_133_6 5651 6523 - 3.A.1.1.42
STP Rep_2060_c_133 Rep_2060_c_133_7 6570 7919 - SBP_bac_1
CAZyme Rep_2060_c_133 Rep_2060_c_133_8 8298 11447 - GH106
TF Rep_2060_c_133 Rep_2060_c_133_9 11513 13003 - HTH_AraC
TC Rep_2060_c_133 Rep_2060_c_133_10 13050 14822 - 9.B.33.1.1
TC Rep_2060_c_133 Rep_2060_c_133_11 14929 15759 - 3.A.1.1.42
TC Rep_2060_c_133 Rep_2060_c_133_12 15761 16237 - 3.A.1.1.7
Gene ID: Rep_2060_c_133_5
Type: TC
Location: 4805 - 5641 (-)
Gene ID: Rep_2060_c_133_6
Type: TC
Location: 5651 - 6523 (-)
Gene ID: Rep_2060_c_133_7
Type: STP
Location: 6570 - 7919 (-)
Gene ID: Rep_2060_c_133_8
Type: CAZyme
Location: 8298 - 11447 (-)
Gene ID: Rep_2060_c_133_9
Type: TF
Location: 11513 - 13003 (-)
Gene ID: Rep_2060_c_133_10
Type: TC
Location: 13050 - 14822 (-)
Gene ID: Rep_2060_c_133_11
Type: TC
Location: 14929 - 15759 (-)
Gene ID: Rep_2060_c_133_12
Type: TC
Location: 15761 - 16237 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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