Cluster: Rep_2060_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_3 | Rep_2060_c_3_109 | 137360 | 138487 | - | GH105 |
| TF | Rep_2060_c_3 | Rep_2060_c_3_110 | 138662 | 139549 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2060_c_3 | Rep_2060_c_3_111 | 139632 | 140939 | - | 2.A.56.1.5 |
| TC | Rep_2060_c_3 | Rep_2060_c_3_112 | 140942 | 141421 | - | 2.A.56.1.5 |
| TC | Rep_2060_c_3 | Rep_2060_c_3_113 | 141483 | 142505 | - | 2.A.56.1.5 |
Gene ID: Rep_2060_c_3_109
Type: CAZyme
Location: 137360 - 138487 (-)
Type: CAZyme
Location: 137360 - 138487 (-)
Gene ID: Rep_2060_c_3_110
Type: TF
Location: 138662 - 139549 (+)
Type: TF
Location: 138662 - 139549 (+)
Gene ID: Rep_2060_c_3_111
Type: TC
Location: 139632 - 140939 (-)
Type: TC
Location: 139632 - 140939 (-)
Gene ID: Rep_2060_c_3_112
Type: TC
Location: 140942 - 141421 (-)
Type: TC
Location: 140942 - 141421 (-)
Gene ID: Rep_2060_c_3_113
Type: TC
Location: 141483 - 142505 (-)
Type: TC
Location: 141483 - 142505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.