Cluster: Rep_2060_CGC117
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_127 | Rep_2060_c_127_13 | 11776 | 12696 | + | 3.A.1.131.1 |
| TC | Rep_2060_c_127 | Rep_2060_c_127_14 | 12689 | 13438 | + | 3.A.1.131.1 |
| pfam | Rep_2060_c_127 | Rep_2060_c_127_15 | 13438 | 14262 | + | BacA |
| pfam | Rep_2060_c_127 | Rep_2060_c_127_16 | 14406 | 15047 | + | VanZ |
| CAZyme | Rep_2060_c_127 | Rep_2060_c_127_17 | 15174 | 18017 | - | GH117 |
Gene ID: Rep_2060_c_127_13
Type: TC
Location: 11776 - 12696 (+)
Type: TC
Location: 11776 - 12696 (+)
Gene ID: Rep_2060_c_127_14
Type: TC
Location: 12689 - 13438 (+)
Type: TC
Location: 12689 - 13438 (+)
Gene ID: Rep_2060_c_127_15
Type: pfam
Location: 13438 - 14262 (+)
Type: pfam
Location: 13438 - 14262 (+)
Gene ID: Rep_2060_c_127_16
Type: pfam
Location: 14406 - 15047 (+)
Type: pfam
Location: 14406 - 15047 (+)
Gene ID: Rep_2060_c_127_17
Type: CAZyme
Location: 15174 - 18017 (-)
Type: CAZyme
Location: 15174 - 18017 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.