Cluster: Rep_2060_CGC116
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_03478
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_125 | Rep_2060_c_125_6 | 4986 | 8099 | - | GH38 |
| CAZyme | Rep_2060_c_125 | Rep_2060_c_125_7 | 8247 | 10289 | - | GH151 |
| TC | Rep_2060_c_125 | Rep_2060_c_125_8 | 10334 | 11173 | - | 3.A.1.1.18 |
| TC | Rep_2060_c_125 | Rep_2060_c_125_9 | 11163 | 12065 | - | 3.A.1.1.7 |
| STP | Rep_2060_c_125 | Rep_2060_c_125_10 | 12080 | 13477 | - | SBP_bac_1 |
| NULL(UNKNOWN) | Rep_2060_c_125 | Rep_2060_c_125_11 | 13850 | 14245 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2060_c_125 | Rep_2060_c_125_12 | 14418 | 16151 | - | 9.B.33.1.1 |
Gene ID: Rep_2060_c_125_6
Type: CAZyme
Location: 4986 - 8099 (-)
Type: CAZyme
Location: 4986 - 8099 (-)
Gene ID: Rep_2060_c_125_7
Type: CAZyme
Location: 8247 - 10289 (-)
Type: CAZyme
Location: 8247 - 10289 (-)
Gene ID: Rep_2060_c_125_8
Type: TC
Location: 10334 - 11173 (-)
Type: TC
Location: 10334 - 11173 (-)
Gene ID: Rep_2060_c_125_9
Type: TC
Location: 11163 - 12065 (-)
Type: TC
Location: 11163 - 12065 (-)
Gene ID: Rep_2060_c_125_10
Type: STP
Location: 12080 - 13477 (-)
Type: STP
Location: 12080 - 13477 (-)
Gene ID: Rep_2060_c_125_11
Type:
Location: 13850 - 14245 (+)
Type:
Location: 13850 - 14245 (+)
Gene ID: Rep_2060_c_125_12
Type: TC
Location: 14418 - 16151 (-)
Type: TC
Location: 14418 - 16151 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.