Cluster: Rep_2060_CGC114
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_120 | Rep_2060_c_120_1 | 43 | 5994 | + | CBM66 | CBM66 | GH127 |
| CAZyme | Rep_2060_c_120 | Rep_2060_c_120_2 | 6094 | 7236 | - | GH88 |
| CAZyme | Rep_2060_c_120 | Rep_2060_c_120_3 | 7257 | 8318 | - | GH117 |
| TC | Rep_2060_c_120 | Rep_2060_c_120_4 | 8363 | 9193 | - | 3.A.1.1.36 |
| TC | Rep_2060_c_120 | Rep_2060_c_120_5 | 9207 | 10262 | - | 3.A.1.1.11 |
| STP | Rep_2060_c_120 | Rep_2060_c_120_6 | 10210 | 11613 | - | SBP_bac_1 |
| TC | Rep_2060_c_120 | Rep_2060_c_120_7 | 11870 | 13615 | + | 8.A.59.2.1 |
Gene ID: Rep_2060_c_120_1
Type: CAZyme
Location: 43 - 5994 (+)
Type: CAZyme
Location: 43 - 5994 (+)
Gene ID: Rep_2060_c_120_2
Type: CAZyme
Location: 6094 - 7236 (-)
Type: CAZyme
Location: 6094 - 7236 (-)
Gene ID: Rep_2060_c_120_3
Type: CAZyme
Location: 7257 - 8318 (-)
Type: CAZyme
Location: 7257 - 8318 (-)
Gene ID: Rep_2060_c_120_4
Type: TC
Location: 8363 - 9193 (-)
Type: TC
Location: 8363 - 9193 (-)
Gene ID: Rep_2060_c_120_5
Type: TC
Location: 9207 - 10262 (-)
Type: TC
Location: 9207 - 10262 (-)
Gene ID: Rep_2060_c_120_6
Type: STP
Location: 10210 - 11613 (-)
Type: STP
Location: 10210 - 11613 (-)
Gene ID: Rep_2060_c_120_7
Type: TC
Location: 11870 - 13615 (+)
Type: TC
Location: 11870 - 13615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.