Cluster: Rep_2060_CGC113
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_07587
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_119 | Rep_2060_c_119_1 | 2 | 850 | - | 2.A.38.4.1 |
| peptidase | Rep_2060_c_119 | Rep_2060_c_119_2 | 1113 | 2495 | - | C82.001 |
| pfam | Rep_2060_c_119 | Rep_2060_c_119_3 | 2719 | 3849 | + | Big_2 | Big_2 |
| CAZyme | Rep_2060_c_119 | Rep_2060_c_119_4 | 3883 | 6036 | + | GH13_11 |
Gene ID: Rep_2060_c_119_1
Type: TC
Location: 2 - 850 (-)
Type: TC
Location: 2 - 850 (-)
Gene ID: Rep_2060_c_119_2
Type: peptidase
Location: 1113 - 2495 (-)
Type: peptidase
Location: 1113 - 2495 (-)
Gene ID: Rep_2060_c_119_3
Type: pfam
Location: 2719 - 3849 (+)
Type: pfam
Location: 2719 - 3849 (+)
Gene ID: Rep_2060_c_119_4
Type: CAZyme
Location: 3883 - 6036 (+)
Type: CAZyme
Location: 3883 - 6036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.