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Cluster: Rep_2060_CGC112

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2060_c_118 Rep_2060_c_118_1 205 1386 + 3.A.4.1.2
NULL(UNKNOWN) Rep_2060_c_118 Rep_2060_c_118_2 1379 1681 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2060_c_118 Rep_2060_c_118_3 1693 2859 + 3.A.4.1.2
CAZyme Rep_2060_c_118 Rep_2060_c_118_4 3379 9084 + GH95
pfam Rep_2060_c_118 Rep_2060_c_118_5 9293 10081 + PseudoU_synth_2 | S4
pfam Rep_2060_c_118 Rep_2060_c_118_6 10128 12122 + BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5 | BRCT_2 | Nlig-Ia
TC Rep_2060_c_118 Rep_2060_c_118_7 12355 14205 + 3.A.16.1.2
STP Rep_2060_c_118 Rep_2060_c_118_8 14260 14859 - TetR_N
pfam Rep_2060_c_118 Rep_2060_c_118_9 15058 17136 + MMPL | MMPL
TC Rep_2060_c_118 Rep_2060_c_118_10 17156 20173 + 9.B.74.1.4
Gene ID: Rep_2060_c_118_1
Type: TC
Location: 205 - 1386 (+)
Gene ID: Rep_2060_c_118_2
Type:
Location: 1379 - 1681 (+)
Gene ID: Rep_2060_c_118_3
Type: TC
Location: 1693 - 2859 (+)
Gene ID: Rep_2060_c_118_4
Type: CAZyme
Location: 3379 - 9084 (+)
Gene ID: Rep_2060_c_118_5
Type: pfam
Location: 9293 - 10081 (+)
Gene ID: Rep_2060_c_118_6
Type: pfam
Location: 10128 - 12122 (+)
Gene ID: Rep_2060_c_118_7
Type: TC
Location: 12355 - 14205 (+)
Gene ID: Rep_2060_c_118_8
Type: STP
Location: 14260 - 14859 (-)
Gene ID: Rep_2060_c_118_9
Type: pfam
Location: 15058 - 17136 (+)
Gene ID: Rep_2060_c_118_10
Type: TC
Location: 17156 - 20173 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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