Cluster: Rep_2060_CGC107
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_01202
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_93 | Rep_2060_c_93_14 | 18036 | 20732 | - | 3.A.3.4.1 |
| NULL(UNKNOWN) | Rep_2060_c_93 | Rep_2060_c_93_15 | 20934 | 21062 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2060_c_93 | Rep_2060_c_93_16 | 21420 | 22832 | - | GH1 |
| pfam | Rep_2060_c_93 | Rep_2060_c_93_17 | 22833 | 23759 | - | ROK |
| pfam | Rep_2060_c_93 | Rep_2060_c_93_18 | 23800 | 24723 | - | IU_nuc_hydro | Sde182_NH-like |
| TC | Rep_2060_c_93 | Rep_2060_c_93_19 | 24710 | 26113 | - | 2.A.2.3.3 |
Gene ID: Rep_2060_c_93_14
Type: TC
Location: 18036 - 20732 (-)
Type: TC
Location: 18036 - 20732 (-)
Gene ID: Rep_2060_c_93_15
Type:
Location: 20934 - 21062 (-)
Type:
Location: 20934 - 21062 (-)
Gene ID: Rep_2060_c_93_16
Type: CAZyme
Location: 21420 - 22832 (-)
Type: CAZyme
Location: 21420 - 22832 (-)
Gene ID: Rep_2060_c_93_17
Type: pfam
Location: 22833 - 23759 (-)
Type: pfam
Location: 22833 - 23759 (-)
Gene ID: Rep_2060_c_93_18
Type: pfam
Location: 23800 - 24723 (-)
Type: pfam
Location: 23800 - 24723 (-)
Gene ID: Rep_2060_c_93_19
Type: TC
Location: 24710 - 26113 (-)
Type: TC
Location: 24710 - 26113 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.