Cluster: Rep_2060_CGC101
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_01599
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_83 | Rep_2060_c_83_13 | 19961 | 21445 | + | 8.A.59.2.1 |
| TC | Rep_2060_c_83 | Rep_2060_c_83_14 | 21456 | 22373 | - | 3.A.1.1.10 |
| TC | Rep_2060_c_83 | Rep_2060_c_83_15 | 22392 | 23336 | - | 3.A.1.1.10 |
| TC | Rep_2060_c_83 | Rep_2060_c_83_16 | 23477 | 25078 | - | 3.A.1.1.10 |
| pfam | Rep_2060_c_83 | Rep_2060_c_83_17 | 25606 | 26700 | - | URO-D |
| CAZyme | Rep_2060_c_83 | Rep_2060_c_83_18 | 26836 | 28185 | - | GH1 |
Gene ID: Rep_2060_c_83_13
Type: TC
Location: 19961 - 21445 (+)
Type: TC
Location: 19961 - 21445 (+)
Gene ID: Rep_2060_c_83_14
Type: TC
Location: 21456 - 22373 (-)
Type: TC
Location: 21456 - 22373 (-)
Gene ID: Rep_2060_c_83_15
Type: TC
Location: 22392 - 23336 (-)
Type: TC
Location: 22392 - 23336 (-)
Gene ID: Rep_2060_c_83_16
Type: TC
Location: 23477 - 25078 (-)
Type: TC
Location: 23477 - 25078 (-)
Gene ID: Rep_2060_c_83_17
Type: pfam
Location: 25606 - 26700 (-)
Type: pfam
Location: 25606 - 26700 (-)
Gene ID: Rep_2060_c_83_18
Type: CAZyme
Location: 26836 - 28185 (-)
Type: CAZyme
Location: 26836 - 28185 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.