Cluster: Rep_2060_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_0 | Rep_2060_c_0_73 | 79858 | 80889 | + | 3.A.1.1.10 |
| TC | Rep_2060_c_0 | Rep_2060_c_0_74 | 80902 | 81801 | + | 3.A.1.1.10 |
| TC | Rep_2060_c_0 | Rep_2060_c_0_75 | 81825 | 83387 | + | 3.A.1.1.10 |
| CAZyme | Rep_2060_c_0 | Rep_2060_c_0_76 | 83429 | 84574 | + | GH88 |
Gene ID: Rep_2060_c_0_73
Type: TC
Location: 79858 - 80889 (+)
Type: TC
Location: 79858 - 80889 (+)
Gene ID: Rep_2060_c_0_74
Type: TC
Location: 80902 - 81801 (+)
Type: TC
Location: 80902 - 81801 (+)
Gene ID: Rep_2060_c_0_75
Type: TC
Location: 81825 - 83387 (+)
Type: TC
Location: 81825 - 83387 (+)
Gene ID: Rep_2060_c_0_76
Type: CAZyme
Location: 83429 - 84574 (+)
Type: CAZyme
Location: 83429 - 84574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.