Cluster: Rep_2044_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2044
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2044_c_0 | Rep_2044_c_0_230 | 223503 | 224351 | + | 4.A.6.1.24 |
| TC | Rep_2044_c_0 | Rep_2044_c_0_231 | 224353 | 225192 | + | 4.A.6.1.6 |
| NULL(UNKNOWN) | Rep_2044_c_0 | Rep_2044_c_0_232 | 225207 | 225485 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2044_c_0 | Rep_2044_c_0_233 | 225581 | 229393 | + | CBM66 | GH32 |
Gene ID: Rep_2044_c_0_230
Type: TC
Location: 223503 - 224351 (+)
Type: TC
Location: 223503 - 224351 (+)
Gene ID: Rep_2044_c_0_231
Type: TC
Location: 224353 - 225192 (+)
Type: TC
Location: 224353 - 225192 (+)
Gene ID: Rep_2044_c_0_232
Type:
Location: 225207 - 225485 (+)
Type:
Location: 225207 - 225485 (+)
Gene ID: Rep_2044_c_0_233
Type: CAZyme
Location: 225581 - 229393 (+)
Type: CAZyme
Location: 225581 - 229393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2044_c_0_230 | vegan > omnivore | 2.37493 | 0.00574 |
| Rep_2044_c_0_231 | vegan > omnivore | 2.61503 | 0.00574 |