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Cluster: Rep_2044_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2044_c_0 Rep_2044_c_0_193 187423 188574 - 1.A.26.1.3
NULL(UNKNOWN) Rep_2044_c_0 Rep_2044_c_0_194 188610 188756 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2044_c_0 Rep_2044_c_0_195 189029 189811 + CE4
NULL(UNKNOWN) Rep_2044_c_0 Rep_2044_c_0_196 189897 191540 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2044_c_0 Rep_2044_c_0_197 191744 193864 + Gln-synt_C | GSIII_N | Gln-synt_C-ter
CAZyme Rep_2044_c_0 Rep_2044_c_0_198 194011 194781 + CE4
TC Rep_2044_c_0 Rep_2044_c_0_199 194882 195442 + 2.A.107.1.2
TC Rep_2044_c_0 Rep_2044_c_0_200 195459 196394 + 2.A.19.5.2
Gene ID: Rep_2044_c_0_193
Type: TC
Location: 187423 - 188574 (-)
Gene ID: Rep_2044_c_0_194
Type:
Location: 188610 - 188756 (-)
Gene ID: Rep_2044_c_0_195
Type: CAZyme
Location: 189029 - 189811 (+)
Gene ID: Rep_2044_c_0_196
Type:
Location: 189897 - 191540 (+)
Gene ID: Rep_2044_c_0_197
Type: pfam
Location: 191744 - 193864 (+)
Gene ID: Rep_2044_c_0_198
Type: CAZyme
Location: 194011 - 194781 (+)
Gene ID: Rep_2044_c_0_199
Type: TC
Location: 194882 - 195442 (+)
Gene ID: Rep_2044_c_0_200
Type: TC
Location: 195459 - 196394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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