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Cluster: Rep_2044_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2044_c_6 Rep_2044_c_6_85 83126 84760 + 2.A.58.2.2
CAZyme Rep_2044_c_6 Rep_2044_c_6_86 84755 86680 - GH13_39
CAZyme Rep_2044_c_6 Rep_2044_c_6_87 86696 89149 - GT35
CAZyme Rep_2044_c_6 Rep_2044_c_6_88 89176 90627 - GT5
pfam Rep_2044_c_6 Rep_2044_c_6_89 90620 91753 - NTP_transferase | Hexapep_GlmU
pfam Rep_2044_c_6 Rep_2044_c_6_90 91767 92951 - NTP_transferase | Hexapep_GlmU
CAZyme Rep_2044_c_6 Rep_2044_c_6_91 92975 95239 - CBM48 | GH13_9
STP Rep_2044_c_6 Rep_2044_c_6_92 95643 96860 - ACT | PALP
TC Rep_2044_c_6 Rep_2044_c_6_93 96861 97793 - 3.A.5.1.1
Gene ID: Rep_2044_c_6_85
Type: TC
Location: 83126 - 84760 (+)
Gene ID: Rep_2044_c_6_86
Type: CAZyme
Location: 84755 - 86680 (-)
Gene ID: Rep_2044_c_6_87
Type: CAZyme
Location: 86696 - 89149 (-)
Gene ID: Rep_2044_c_6_88
Type: CAZyme
Location: 89176 - 90627 (-)
Gene ID: Rep_2044_c_6_89
Type: pfam
Location: 90620 - 91753 (-)
Gene ID: Rep_2044_c_6_90
Type: pfam
Location: 91767 - 92951 (-)
Gene ID: Rep_2044_c_6_91
Type: CAZyme
Location: 92975 - 95239 (-)
Gene ID: Rep_2044_c_6_92
Type: STP
Location: 95643 - 96860 (-)
Gene ID: Rep_2044_c_6_93
Type: TC
Location: 96861 - 97793 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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