Cluster: Rep_2044_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: Rep_2044
- CGC Family ID: CGCFAM_01470
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2044_c_0 | Rep_2044_c_0_69 | 68850 | 69560 | + | 3.A.16.1.3 |
| TF | Rep_2044_c_0 | Rep_2044_c_0_70 | 69702 | 70679 | + | LacI |
| pfam | Rep_2044_c_0 | Rep_2044_c_0_71 | 71059 | 71907 | + | Glyco_hydro_32N |
| TC | Rep_2044_c_0 | Rep_2044_c_0_72 | 71913 | 73847 | + | 4.A.1.2.8 |
| CAZyme | Rep_2044_c_0 | Rep_2044_c_0_73 | 73852 | 75243 | + | GH32 |
| TC | Rep_2044_c_0 | Rep_2044_c_0_74 | 75662 | 76111 | - | 2.A.98.1.4 |
Gene ID: Rep_2044_c_0_69
Type: TC
Location: 68850 - 69560 (+)
Type: TC
Location: 68850 - 69560 (+)
Gene ID: Rep_2044_c_0_70
Type: TF
Location: 69702 - 70679 (+)
Type: TF
Location: 69702 - 70679 (+)
Gene ID: Rep_2044_c_0_71
Type: pfam
Location: 71059 - 71907 (+)
Type: pfam
Location: 71059 - 71907 (+)
Gene ID: Rep_2044_c_0_72
Type: TC
Location: 71913 - 73847 (+)
Type: TC
Location: 71913 - 73847 (+)
Gene ID: Rep_2044_c_0_73
Type: CAZyme
Location: 73852 - 75243 (+)
Type: CAZyme
Location: 73852 - 75243 (+)
Gene ID: Rep_2044_c_0_74
Type: TC
Location: 75662 - 76111 (-)
Type: TC
Location: 75662 - 76111 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.