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Cluster: Rep_2044_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2044_c_2 Rep_2044_c_2_172 161831 163717 + 4.A.1.2.11
CAZyme Rep_2044_c_2 Rep_2044_c_2_173 163732 165141 + GH1
pfam Rep_2044_c_2 Rep_2044_c_2_174 165177 166004 + PRD | PRD | CAT_RBD
NULL(UNKNOWN) Rep_2044_c_2 Rep_2044_c_2_175 166932 167147 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2044_c_2 Rep_2044_c_2_176 167401 168105 + 3.A.1.122.7
pfam Rep_2044_c_2 Rep_2044_c_2_177 168115 171252 + FtsX | FtsX | MacB_PCD
CAZyme Rep_2044_c_2 Rep_2044_c_2_178 171282 172595 + GH13_20
STP Rep_2044_c_2 Rep_2044_c_2_179 172676 174223 + HD
pfam Rep_2044_c_2 Rep_2044_c_2_180 174506 175306 + adh_short | Epimerase | KR | adh_short_C2
TC Rep_2044_c_2 Rep_2044_c_2_181 175358 177214 + 4.A.2.1.2
Gene ID: Rep_2044_c_2_172
Type: TC
Location: 161831 - 163717 (+)
Gene ID: Rep_2044_c_2_173
Type: CAZyme
Location: 163732 - 165141 (+)
Gene ID: Rep_2044_c_2_174
Type: pfam
Location: 165177 - 166004 (+)
Gene ID: Rep_2044_c_2_175
Type:
Location: 166932 - 167147 (-)
Gene ID: Rep_2044_c_2_176
Type: TC
Location: 167401 - 168105 (+)
Gene ID: Rep_2044_c_2_177
Type: pfam
Location: 168115 - 171252 (+)
Gene ID: Rep_2044_c_2_178
Type: CAZyme
Location: 171282 - 172595 (+)
Gene ID: Rep_2044_c_2_179
Type: STP
Location: 172676 - 174223 (+)
Gene ID: Rep_2044_c_2_180
Type: pfam
Location: 174506 - 175306 (+)
Gene ID: Rep_2044_c_2_181
Type: TC
Location: 175358 - 177214 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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