dbCAN HGM

Cluster: Rep_202_CGC29

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_202_c_16	Rep_202_c_16_189	251926	252834	+	GT2
pfam	Rep_202_c_16	Rep_202_c_16_190	252889	253905	+	Acyl_transf_3
peptidase	Rep_202_c_16	Rep_202_c_16_191	254821	255813	+	U32.UPW
CAZyme	Rep_202_c_16	Rep_202_c_16_192	255880	256833	+	GT2
CAZyme	Rep_202_c_16	Rep_202_c_16_193	256866	258041	+	GT4
pfam	Rep_202_c_16	Rep_202_c_16_194	258183	259523	+	AAA_14 \| DUF4143
CAZyme	Rep_202_c_16	Rep_202_c_16_195	259540	260541	-	GT2
CAZyme	Rep_202_c_16	Rep_202_c_16_196	260538	261440	-	GT2
pfam	Rep_202_c_16	Rep_202_c_16_197	261923	264298	-	FtsX \| FtsX \| MacB_PCD \| MacB_PCD
TC	Rep_202_c_16	Rep_202_c_16_198	264316	264993	-	3.A.1.122.2

Gene ID: Rep_202_c_16_189
Type: CAZyme
Location: 251926 - 252834 (+)

Gene ID: Rep_202_c_16_190
Type: pfam
Location: 252889 - 253905 (+)

Gene ID: Rep_202_c_16_191
Type: peptidase
Location: 254821 - 255813 (+)

Gene ID: Rep_202_c_16_192
Type: CAZyme
Location: 255880 - 256833 (+)

Gene ID: Rep_202_c_16_193
Type: CAZyme
Location: 256866 - 258041 (+)

Gene ID: Rep_202_c_16_194
Type: pfam
Location: 258183 - 259523 (+)

Gene ID: Rep_202_c_16_195
Type: CAZyme
Location: 259540 - 260541 (-)

Gene ID: Rep_202_c_16_196
Type: CAZyme
Location: 260538 - 261440 (-)

Gene ID: Rep_202_c_16_197
Type: pfam
Location: 261923 - 264298 (-)

Gene ID: Rep_202_c_16_198
Type: TC
Location: 264316 - 264993 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.