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Cluster: Rep_202_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_202_c_15 Rep_202_c_15_32 39682 43818 + GH142 | GH143 | GH43_18
CAZyme Rep_202_c_15 Rep_202_c_15_33 43921 45219 + CE19
pfam Rep_202_c_15 Rep_202_c_15_34 45428 46984 + PDDEXK_9 | AAA-ATPase_like
pfam Rep_202_c_15 Rep_202_c_15_35 47097 47855 - Acyltransferase
CAZyme Rep_202_c_15 Rep_202_c_15_36 47890 48630 - GT2
pfam Rep_202_c_15 Rep_202_c_15_37 48808 52290 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
pfam Rep_202_c_15 Rep_202_c_15_38 52341 53783 + SSF
TC Rep_202_c_15 Rep_202_c_15_39 53796 54731 + 2.A.69.4.2
Gene ID: Rep_202_c_15_32
Type: CAZyme
Location: 39682 - 43818 (+)
Gene ID: Rep_202_c_15_33
Type: CAZyme
Location: 43921 - 45219 (+)
Gene ID: Rep_202_c_15_34
Type: pfam
Location: 45428 - 46984 (+)
Gene ID: Rep_202_c_15_35
Type: pfam
Location: 47097 - 47855 (-)
Gene ID: Rep_202_c_15_36
Type: CAZyme
Location: 47890 - 48630 (-)
Gene ID: Rep_202_c_15_37
Type: pfam
Location: 48808 - 52290 (+)
Gene ID: Rep_202_c_15_38
Type: pfam
Location: 52341 - 53783 (+)
Gene ID: Rep_202_c_15_39
Type: TC
Location: 53796 - 54731 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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