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Cluster: Rep_202_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_202_c_11 Rep_202_c_11_249 340981 342198 - PL1
STP Rep_202_c_11 Rep_202_c_11_250 342442 343797 - Pyr_redox_2
CAZyme Rep_202_c_11 Rep_202_c_11_251 344013 345434 - GH28
CAZyme Rep_202_c_11 Rep_202_c_11_252 345862 346842 - CE8
STP Rep_202_c_11 Rep_202_c_11_253 346922 349207 - HD
CAZyme Rep_202_c_11 Rep_202_c_11_254 349246 350598 - GH23
pfam Rep_202_c_11 Rep_202_c_11_255 350775 351617 - DUF5683
pfam Rep_202_c_11 Rep_202_c_11_256 351637 352530 - ParBc | HTH_ParB | ParB_dimer
TC Rep_202_c_11 Rep_202_c_11_257 352552 353328 - 8.A.3.2.3
pfam Rep_202_c_11 Rep_202_c_11_258 353482 354249 + SurE
CAZyme Rep_202_c_11 Rep_202_c_11_259 354316 355461 + GT19
Gene ID: Rep_202_c_11_249
Type: CAZyme
Location: 340981 - 342198 (-)
Gene ID: Rep_202_c_11_250
Type: STP
Location: 342442 - 343797 (-)
Gene ID: Rep_202_c_11_251
Type: CAZyme
Location: 344013 - 345434 (-)
Gene ID: Rep_202_c_11_252
Type: CAZyme
Location: 345862 - 346842 (-)
Gene ID: Rep_202_c_11_253
Type: STP
Location: 346922 - 349207 (-)
Gene ID: Rep_202_c_11_254
Type: CAZyme
Location: 349246 - 350598 (-)
Gene ID: Rep_202_c_11_255
Type: pfam
Location: 350775 - 351617 (-)
Gene ID: Rep_202_c_11_256
Type: pfam
Location: 351637 - 352530 (-)
Gene ID: Rep_202_c_11_257
Type: TC
Location: 352552 - 353328 (-)
Gene ID: Rep_202_c_11_258
Type: pfam
Location: 353482 - 354249 (+)
Gene ID: Rep_202_c_11_259
Type: CAZyme
Location: 354316 - 355461 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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