Cluster: Rep_202_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: Rep_202
- CGC Family ID: CGCFAM_00175
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_202_c_7 | Rep_202_c_7_106 | 154335 | 157634 | + | 1.B.14.6.1 |
| pfam | Rep_202_c_7 | Rep_202_c_7_107 | 157656 | 159866 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | Rep_202_c_7 | Rep_202_c_7_108 | 160087 | 161751 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_202_c_7 | Rep_202_c_7_109 | 161757 | 162788 | - | 8.A.1.1.2 |
| pfam | Rep_202_c_7 | Rep_202_c_7_110 | 162888 | 164195 | - | OEP | OEP |
| TF | Rep_202_c_7 | Rep_202_c_7_111 | 164418 | 165254 | + | HTH_AraC |
| CAZyme | Rep_202_c_7 | Rep_202_c_7_112 | 165366 | 168443 | + | PL29 |
Gene ID: Rep_202_c_7_106
Type: TC
Location: 154335 - 157634 (+)
Type: TC
Location: 154335 - 157634 (+)
Gene ID: Rep_202_c_7_107
Type: pfam
Location: 157656 - 159866 (+)
Type: pfam
Location: 157656 - 159866 (+)
Gene ID: Rep_202_c_7_108
Type:
Location: 160087 - 161751 (-)
Type:
Location: 160087 - 161751 (-)
Gene ID: Rep_202_c_7_109
Type: TC
Location: 161757 - 162788 (-)
Type: TC
Location: 161757 - 162788 (-)
Gene ID: Rep_202_c_7_110
Type: pfam
Location: 162888 - 164195 (-)
Type: pfam
Location: 162888 - 164195 (-)
Gene ID: Rep_202_c_7_111
Type: TF
Location: 164418 - 165254 (+)
Type: TF
Location: 164418 - 165254 (+)
Gene ID: Rep_202_c_7_112
Type: CAZyme
Location: 165366 - 168443 (+)
Type: CAZyme
Location: 165366 - 168443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900557405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.