Cluster: Rep_202_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_202
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_202_c_7 | Rep_202_c_7_62 | 83320 | 86433 | + | 1.B.14.6.1 |
| pfam | Rep_202_c_7 | Rep_202_c_7_63 | 86494 | 88266 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_202_c_7 | Rep_202_c_7_64 | 88394 | 90109 | + | GH32 |
| TC | Rep_202_c_7 | Rep_202_c_7_65 | 90134 | 91288 | + | 2.A.1.7.17 |
Gene ID: Rep_202_c_7_62
Type: TC
Location: 83320 - 86433 (+)
Type: TC
Location: 83320 - 86433 (+)
Gene ID: Rep_202_c_7_63
Type: pfam
Location: 86494 - 88266 (+)
Type: pfam
Location: 86494 - 88266 (+)
Gene ID: Rep_202_c_7_64
Type: CAZyme
Location: 88394 - 90109 (+)
Type: CAZyme
Location: 88394 - 90109 (+)
Gene ID: Rep_202_c_7_65
Type: TC
Location: 90134 - 91288 (+)
Type: TC
Location: 90134 - 91288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900557405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_202_c_7_64 | vegetarian > omnivore | 1.10376 | 0.01882 |