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Cluster: Rep_201_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_201_c_0 Rep_201_c_0_2815 3355430 3357013 + GH28
CAZyme Rep_201_c_0 Rep_201_c_0_2816 3357024 3358403 + GH28
pfam Rep_201_c_0 Rep_201_c_0_2817 3358400 3359494 - Porin_O_P | Porin_4
pfam Rep_201_c_0 Rep_201_c_0_2818 3359566 3360813 - Hydrolase | Hydrolase_3 | HAD | ACT_6
TC Rep_201_c_0 Rep_201_c_0_2819 3361178 3362533 - 2.A.25.1.3
NULL(UNKNOWN) Rep_201_c_0 Rep_201_c_0_2820 3362968 3363147 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_201_c_0 Rep_201_c_0_2821 3363311 3364105 + DUF4143
TC Rep_201_c_0 Rep_201_c_0_2822 3365111 3365752 + 9.B.18.1.3
TC Rep_201_c_0 Rep_201_c_0_2823 3365774 3368362 + 1.B.18.1.2
pfam Rep_201_c_0 Rep_201_c_0_2824 3368448 3369125 + Hexapep
NULL(UNKNOWN) Rep_201_c_0 Rep_201_c_0_2825 3369137 3370456 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_201_c_0 Rep_201_c_0_2826 3370467 3371717 + GT2
pfam Rep_201_c_0 Rep_201_c_0_2827 3371730 3372845 + Wzz
pfam Rep_201_c_0 Rep_201_c_0_2828 3372867 3374003 + EpsG
CAZyme Rep_201_c_0 Rep_201_c_0_2829 3374037 3375203 + GT4
pfam Rep_201_c_0 Rep_201_c_0_2830 3375237 3376382 + Glyco_trans_1_4
pfam Rep_201_c_0 Rep_201_c_0_2831 3376556 3377518 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme Rep_201_c_0 Rep_201_c_0_2832 3377543 3378298 + GT2
TC Rep_201_c_0 Rep_201_c_0_2833 3378548 3379654 - 3.D.2.3.1
Gene ID: Rep_201_c_0_2815
Type: CAZyme
Location: 3355430 - 3357013 (+)
Gene ID: Rep_201_c_0_2816
Type: CAZyme
Location: 3357024 - 3358403 (+)
Gene ID: Rep_201_c_0_2817
Type: pfam
Location: 3358400 - 3359494 (-)
Gene ID: Rep_201_c_0_2818
Type: pfam
Location: 3359566 - 3360813 (-)
Gene ID: Rep_201_c_0_2819
Type: TC
Location: 3361178 - 3362533 (-)
Gene ID: Rep_201_c_0_2820
Type:
Location: 3362968 - 3363147 (+)
Gene ID: Rep_201_c_0_2821
Type: pfam
Location: 3363311 - 3364105 (+)
Gene ID: Rep_201_c_0_2822
Type: TC
Location: 3365111 - 3365752 (+)
Gene ID: Rep_201_c_0_2823
Type: TC
Location: 3365774 - 3368362 (+)
Gene ID: Rep_201_c_0_2824
Type: pfam
Location: 3368448 - 3369125 (+)
Gene ID: Rep_201_c_0_2825
Type:
Location: 3369137 - 3370456 (+)
Gene ID: Rep_201_c_0_2826
Type: CAZyme
Location: 3370467 - 3371717 (+)
Gene ID: Rep_201_c_0_2827
Type: pfam
Location: 3371730 - 3372845 (+)
Gene ID: Rep_201_c_0_2828
Type: pfam
Location: 3372867 - 3374003 (+)
Gene ID: Rep_201_c_0_2829
Type: CAZyme
Location: 3374037 - 3375203 (+)
Gene ID: Rep_201_c_0_2830
Type: pfam
Location: 3375237 - 3376382 (+)
Gene ID: Rep_201_c_0_2831
Type: pfam
Location: 3376556 - 3377518 (+)
Gene ID: Rep_201_c_0_2832
Type: CAZyme
Location: 3377543 - 3378298 (+)
Gene ID: Rep_201_c_0_2833
Type: TC
Location: 3378548 - 3379654 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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