Cluster: Rep_201_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_201
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_201_c_0 | Rep_201_c_0_1795 | 2086845 | 2087963 | - | GT28 |
| TC | Rep_201_c_0 | Rep_201_c_0_1796 | 2087987 | 2089294 | - | 2.A.103.1.2 |
| pfam | Rep_201_c_0 | Rep_201_c_0_1797 | 2089321 | 2090652 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | Rep_201_c_0 | Rep_201_c_0_1798 | 2090676 | 2091947 | - | 9.B.146.1.3 |
Gene ID: Rep_201_c_0_1795
Type: CAZyme
Location: 2086845 - 2087963 (-)
Type: CAZyme
Location: 2086845 - 2087963 (-)
Gene ID: Rep_201_c_0_1796
Type: TC
Location: 2087987 - 2089294 (-)
Type: TC
Location: 2087987 - 2089294 (-)
Gene ID: Rep_201_c_0_1797
Type: pfam
Location: 2089321 - 2090652 (-)
Type: pfam
Location: 2089321 - 2090652 (-)
Gene ID: Rep_201_c_0_1798
Type: TC
Location: 2090676 - 2091947 (-)
Type: TC
Location: 2090676 - 2091947 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900548745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.