Cluster: Rep_2008_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2008_c_100 | Rep_2008_c_100_8 | 7205 | 8614 | - | 3.A.6.1.1 |
| pfam | Rep_2008_c_100 | Rep_2008_c_100_9 | 8977 | 10131 | + | malic | AlaDh_PNT_C | Malic_M |
| TC | Rep_2008_c_100 | Rep_2008_c_100_10 | 10190 | 11485 | - | 9.A.40.2.2 |
| pfam | Rep_2008_c_100 | Rep_2008_c_100_11 | 11567 | 12415 | - | VCA0040-like |
| CAZyme | Rep_2008_c_100 | Rep_2008_c_100_12 | 12509 | 13225 | - | CE4 |
| TC | Rep_2008_c_100 | Rep_2008_c_100_13 | 13244 | 14575 | - | 2.A.66.1.23 |
Gene ID: Rep_2008_c_100_8
Type: TC
Location: 7205 - 8614 (-)
Type: TC
Location: 7205 - 8614 (-)
Gene ID: Rep_2008_c_100_9
Type: pfam
Location: 8977 - 10131 (+)
Type: pfam
Location: 8977 - 10131 (+)
Gene ID: Rep_2008_c_100_10
Type: TC
Location: 10190 - 11485 (-)
Type: TC
Location: 10190 - 11485 (-)
Gene ID: Rep_2008_c_100_11
Type: pfam
Location: 11567 - 12415 (-)
Type: pfam
Location: 11567 - 12415 (-)
Gene ID: Rep_2008_c_100_12
Type: CAZyme
Location: 12509 - 13225 (-)
Type: CAZyme
Location: 12509 - 13225 (-)
Gene ID: Rep_2008_c_100_13
Type: TC
Location: 13244 - 14575 (-)
Type: TC
Location: 13244 - 14575 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.