Cluster: Rep_2008_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2008_c_96 | Rep_2008_c_96_12 | 11453 | 13798 | + | GH73 |
| CAZyme | Rep_2008_c_96 | Rep_2008_c_96_13 | 13770 | 16148 | + | GH73 |
| peptidase | Rep_2008_c_96 | Rep_2008_c_96_14 | 16238 | 18289 | + | U69.UPW |
| pfam | Rep_2008_c_96 | Rep_2008_c_96_15 | 18440 | 19726 | + | Aminotran_5 | Cys_Met_Meta_PP |
| TC | Rep_2008_c_96 | Rep_2008_c_96_16 | 19746 | 20480 | + | 3.A.1.122.14 |
Gene ID: Rep_2008_c_96_12
Type: CAZyme
Location: 11453 - 13798 (+)
Type: CAZyme
Location: 11453 - 13798 (+)
Gene ID: Rep_2008_c_96_13
Type: CAZyme
Location: 13770 - 16148 (+)
Type: CAZyme
Location: 13770 - 16148 (+)
Gene ID: Rep_2008_c_96_14
Type: peptidase
Location: 16238 - 18289 (+)
Type: peptidase
Location: 16238 - 18289 (+)
Gene ID: Rep_2008_c_96_15
Type: pfam
Location: 18440 - 19726 (+)
Type: pfam
Location: 18440 - 19726 (+)
Gene ID: Rep_2008_c_96_16
Type: TC
Location: 19746 - 20480 (+)
Type: TC
Location: 19746 - 20480 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.