Cluster: Rep_2008_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2008_c_95 | Rep_2008_c_95_1 | 1 | 858 | + | 2.A.50.2.1 |
| pfam | Rep_2008_c_95 | Rep_2008_c_95_2 | 869 | 2083 | + | ALGX |
| pfam | Rep_2008_c_95 | Rep_2008_c_95_3 | 2076 | 4154 | + | Sulfatase |
| CAZyme | Rep_2008_c_95 | Rep_2008_c_95_4 | 4164 | 5192 | + | CE12 |
Gene ID: Rep_2008_c_95_1
Type: TC
Location: 1 - 858 (+)
Type: TC
Location: 1 - 858 (+)
Gene ID: Rep_2008_c_95_2
Type: pfam
Location: 869 - 2083 (+)
Type: pfam
Location: 869 - 2083 (+)
Gene ID: Rep_2008_c_95_3
Type: pfam
Location: 2076 - 4154 (+)
Type: pfam
Location: 2076 - 4154 (+)
Gene ID: Rep_2008_c_95_4
Type: CAZyme
Location: 4164 - 5192 (+)
Type: CAZyme
Location: 4164 - 5192 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.