Cluster: Rep_2008_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2008_c_79 | Rep_2008_c_79_5 | 2470 | 4299 | + | GH23 |
| pfam | Rep_2008_c_79 | Rep_2008_c_79_6 | 4312 | 4914 | + | DUF5038 |
| TC | Rep_2008_c_79 | Rep_2008_c_79_7 | 4911 | 8147 | + | 3.A.7.7.1 |
Gene ID: Rep_2008_c_79_5
Type: CAZyme
Location: 2470 - 4299 (+)
Type: CAZyme
Location: 2470 - 4299 (+)
Gene ID: Rep_2008_c_79_6
Type: pfam
Location: 4312 - 4914 (+)
Type: pfam
Location: 4312 - 4914 (+)
Gene ID: Rep_2008_c_79_7
Type: TC
Location: 4911 - 8147 (+)
Type: TC
Location: 4911 - 8147 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.