Cluster: Rep_2008_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2008_c_377 | Rep_2008_c_377_15 | 17658 | 18707 | - | GT2 |
| CAZyme | Rep_2008_c_377 | Rep_2008_c_377_16 | 18704 | 19699 | - | GT2 |
| CAZyme | Rep_2008_c_377 | Rep_2008_c_377_17 | 19726 | 20853 | - | GT2 |
| CAZyme | Rep_2008_c_377 | Rep_2008_c_377_18 | 20870 | 21928 | - | GT2 |
| TC | Rep_2008_c_377 | Rep_2008_c_377_19 | 21925 | 23304 | - | 9.B.18.1.3 |
| TC | Rep_2008_c_377 | Rep_2008_c_377_20 | 23340 | 24083 | - | 3.A.1.103.5 |
| TC | Rep_2008_c_377 | Rep_2008_c_377_21 | 24101 | 24877 | - | 3.A.1.103.1 |
Gene ID: Rep_2008_c_377_15
Type: CAZyme
Location: 17658 - 18707 (-)
Type: CAZyme
Location: 17658 - 18707 (-)
Gene ID: Rep_2008_c_377_16
Type: CAZyme
Location: 18704 - 19699 (-)
Type: CAZyme
Location: 18704 - 19699 (-)
Gene ID: Rep_2008_c_377_17
Type: CAZyme
Location: 19726 - 20853 (-)
Type: CAZyme
Location: 19726 - 20853 (-)
Gene ID: Rep_2008_c_377_18
Type: CAZyme
Location: 20870 - 21928 (-)
Type: CAZyme
Location: 20870 - 21928 (-)
Gene ID: Rep_2008_c_377_19
Type: TC
Location: 21925 - 23304 (-)
Type: TC
Location: 21925 - 23304 (-)
Gene ID: Rep_2008_c_377_20
Type: TC
Location: 23340 - 24083 (-)
Type: TC
Location: 23340 - 24083 (-)
Gene ID: Rep_2008_c_377_21
Type: TC
Location: 24101 - 24877 (-)
Type: TC
Location: 24101 - 24877 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.