Cluster: Rep_2008_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2008_c_330 | Rep_2008_c_330_2 | 658 | 1500 | + | 3.A.25.2.1 |
| STP | Rep_2008_c_330 | Rep_2008_c_330_3 | 1505 | 1804 | + | Rhodanese |
| STP | Rep_2008_c_330 | Rep_2008_c_330_4 | 1895 | 2701 | + | PfkB |
| TC | Rep_2008_c_330 | Rep_2008_c_330_5 | 2703 | 3887 | + | 2.A.39.1.3 |
| CAZyme | Rep_2008_c_330 | Rep_2008_c_330_6 | 3968 | 4921 | - | CE1 |
| CAZyme | Rep_2008_c_330 | Rep_2008_c_330_7 | 4936 | 6057 | - | CE1 |
| CAZyme | Rep_2008_c_330 | Rep_2008_c_330_8 | 6041 | 7201 | - | CE1 |
| TC | Rep_2008_c_330 | Rep_2008_c_330_9 | 7185 | 8273 | - | 2.A.66.1.2 |
Gene ID: Rep_2008_c_330_2
Type: TC
Location: 658 - 1500 (+)
Type: TC
Location: 658 - 1500 (+)
Gene ID: Rep_2008_c_330_3
Type: STP
Location: 1505 - 1804 (+)
Type: STP
Location: 1505 - 1804 (+)
Gene ID: Rep_2008_c_330_4
Type: STP
Location: 1895 - 2701 (+)
Type: STP
Location: 1895 - 2701 (+)
Gene ID: Rep_2008_c_330_5
Type: TC
Location: 2703 - 3887 (+)
Type: TC
Location: 2703 - 3887 (+)
Gene ID: Rep_2008_c_330_6
Type: CAZyme
Location: 3968 - 4921 (-)
Type: CAZyme
Location: 3968 - 4921 (-)
Gene ID: Rep_2008_c_330_7
Type: CAZyme
Location: 4936 - 6057 (-)
Type: CAZyme
Location: 4936 - 6057 (-)
Gene ID: Rep_2008_c_330_8
Type: CAZyme
Location: 6041 - 7201 (-)
Type: CAZyme
Location: 6041 - 7201 (-)
Gene ID: Rep_2008_c_330_9
Type: TC
Location: 7185 - 8273 (-)
Type: TC
Location: 7185 - 8273 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.