Cluster: Rep_2008_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2008
- CGC Family ID: CGCFAM_01446
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2008_c_180 | Rep_2008_c_180_3 | 1865 | 5149 | + | GH43_4 |
| STP | Rep_2008_c_180 | Rep_2008_c_180_4 | 5455 | 8502 | + | SBP_bac_1 |
| TC | Rep_2008_c_180 | Rep_2008_c_180_5 | 8524 | 9408 | + | 3.A.1.1.34 |
| TC | Rep_2008_c_180 | Rep_2008_c_180_6 | 9421 | 10293 | + | 3.A.1.1.39 |
Gene ID: Rep_2008_c_180_3
Type: CAZyme
Location: 1865 - 5149 (+)
Type: CAZyme
Location: 1865 - 5149 (+)
Gene ID: Rep_2008_c_180_4
Type: STP
Location: 5455 - 8502 (+)
Type: STP
Location: 5455 - 8502 (+)
Gene ID: Rep_2008_c_180_5
Type: TC
Location: 8524 - 9408 (+)
Type: TC
Location: 8524 - 9408 (+)
Gene ID: Rep_2008_c_180_6
Type: TC
Location: 9421 - 10293 (+)
Type: TC
Location: 9421 - 10293 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.