Cluster: Rep_2008_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2008_c_48 | Rep_2008_c_48_1 | 1 | 1491 | - | GH31_4 |
| TF | Rep_2008_c_48 | Rep_2008_c_48_2 | 1615 | 2466 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2008_c_48 | Rep_2008_c_48_3 | 2555 | 4351 | - | 3.A.1.106.3 |
| TC | Rep_2008_c_48 | Rep_2008_c_48_4 | 4344 | 6167 | - | 3.A.1.106.3 |
| TC | Rep_2008_c_48 | Rep_2008_c_48_5 | 6343 | 7524 | - | 2.A.86.1.8 |
Gene ID: Rep_2008_c_48_1
Type: CAZyme
Location: 1 - 1491 (-)
Type: CAZyme
Location: 1 - 1491 (-)
Gene ID: Rep_2008_c_48_2
Type: TF
Location: 1615 - 2466 (+)
Type: TF
Location: 1615 - 2466 (+)
Gene ID: Rep_2008_c_48_3
Type: TC
Location: 2555 - 4351 (-)
Type: TC
Location: 2555 - 4351 (-)
Gene ID: Rep_2008_c_48_4
Type: TC
Location: 4344 - 6167 (-)
Type: TC
Location: 4344 - 6167 (-)
Gene ID: Rep_2008_c_48_5
Type: TC
Location: 6343 - 7524 (-)
Type: TC
Location: 6343 - 7524 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.