Cluster: Rep_2001_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2001_c_34 | Rep_2001_c_34_12 | 10012 | 11307 | + | GT4 |
| pfam | Rep_2001_c_34 | Rep_2001_c_34_13 | 11552 | 12337 | - | rve | HTH_21 | rve_2 | rve_3 |
| pfam | Rep_2001_c_34 | Rep_2001_c_34_14 | 12397 | 12900 | - | HTH_28 | HTH_28 |
| TC | Rep_2001_c_34 | Rep_2001_c_34_15 | 13141 | 14535 | - | 2.A.25.1.9 |
| TC | Rep_2001_c_34 | Rep_2001_c_34_16 | 15394 | 16221 | - | 3.A.1.132.3 |
| STP | Rep_2001_c_34 | Rep_2001_c_34_17 | 16243 | 16593 | - | Sigma70_r4_2 |
| TC | Rep_2001_c_34 | Rep_2001_c_34_18 | 16754 | 18112 | - | 2.A.3.8.12 |
Gene ID: Rep_2001_c_34_12
Type: CAZyme
Location: 10012 - 11307 (+)
Type: CAZyme
Location: 10012 - 11307 (+)
Gene ID: Rep_2001_c_34_13
Type: pfam
Location: 11552 - 12337 (-)
Type: pfam
Location: 11552 - 12337 (-)
Gene ID: Rep_2001_c_34_14
Type: pfam
Location: 12397 - 12900 (-)
Type: pfam
Location: 12397 - 12900 (-)
Gene ID: Rep_2001_c_34_15
Type: TC
Location: 13141 - 14535 (-)
Type: TC
Location: 13141 - 14535 (-)
Gene ID: Rep_2001_c_34_16
Type: TC
Location: 15394 - 16221 (-)
Type: TC
Location: 15394 - 16221 (-)
Gene ID: Rep_2001_c_34_17
Type: STP
Location: 16243 - 16593 (-)
Type: STP
Location: 16243 - 16593 (-)
Gene ID: Rep_2001_c_34_18
Type: TC
Location: 16754 - 18112 (-)
Type: TC
Location: 16754 - 18112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.