Cluster: Rep_2001_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2001
- CGC Family ID: CGCFAM_00190
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2001_c_23 | Rep_2001_c_23_17 | 16089 | 16892 | - | CE4 |
| pfam | Rep_2001_c_23 | Rep_2001_c_23_18 | 16963 | 18225 | + | TGT |
| pfam | Rep_2001_c_23 | Rep_2001_c_23_19 | 18313 | 18759 | + | YajC |
| TC | Rep_2001_c_23 | Rep_2001_c_23_20 | 19137 | 20255 | + | 3.A.1.2.17 |
| TC | Rep_2001_c_23 | Rep_2001_c_23_21 | 20385 | 21944 | + | 3.A.1.2.12 |
| TC | Rep_2001_c_23 | Rep_2001_c_23_22 | 21937 | 23046 | + | 3.A.1.2.12 |
| TC | Rep_2001_c_23 | Rep_2001_c_23_23 | 23046 | 23999 | + | 3.A.1.2.18 |
Gene ID: Rep_2001_c_23_17
Type: CAZyme
Location: 16089 - 16892 (-)
Type: CAZyme
Location: 16089 - 16892 (-)
Gene ID: Rep_2001_c_23_18
Type: pfam
Location: 16963 - 18225 (+)
Type: pfam
Location: 16963 - 18225 (+)
Gene ID: Rep_2001_c_23_19
Type: pfam
Location: 18313 - 18759 (+)
Type: pfam
Location: 18313 - 18759 (+)
Gene ID: Rep_2001_c_23_20
Type: TC
Location: 19137 - 20255 (+)
Type: TC
Location: 19137 - 20255 (+)
Gene ID: Rep_2001_c_23_21
Type: TC
Location: 20385 - 21944 (+)
Type: TC
Location: 20385 - 21944 (+)
Gene ID: Rep_2001_c_23_22
Type: TC
Location: 21937 - 23046 (+)
Type: TC
Location: 21937 - 23046 (+)
Gene ID: Rep_2001_c_23_23
Type: TC
Location: 23046 - 23999 (+)
Type: TC
Location: 23046 - 23999 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.