Cluster: Rep_1999_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1999
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1999_c_16 | Rep_1999_c_16_10 | 13787 | 14668 | - | 3.A.1.132.7 |
| TC | Rep_1999_c_16 | Rep_1999_c_16_11 | 14665 | 15591 | - | 3.A.1.147.1 |
| NULL(UNKNOWN) | Rep_1999_c_16 | Rep_1999_c_16_12 | 15584 | 18094 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1999_c_16 | Rep_1999_c_16_13 | 18177 | 20051 | - | UvrD-helicase | ResIII | AAA_19 | UvrD_C | UvrD_C_2 |
| CAZyme | Rep_1999_c_16 | Rep_1999_c_16_14 | 20223 | 21539 | + | GT4 |
| TC | Rep_1999_c_16 | Rep_1999_c_16_15 | 21876 | 23246 | - | 2.A.25.1.3 |
| TC | Rep_1999_c_16 | Rep_1999_c_16_16 | 23861 | 25231 | - | 2.A.25.1.3 |
Gene ID: Rep_1999_c_16_10
Type: TC
Location: 13787 - 14668 (-)
Type: TC
Location: 13787 - 14668 (-)
Gene ID: Rep_1999_c_16_11
Type: TC
Location: 14665 - 15591 (-)
Type: TC
Location: 14665 - 15591 (-)
Gene ID: Rep_1999_c_16_12
Type:
Location: 15584 - 18094 (-)
Type:
Location: 15584 - 18094 (-)
Gene ID: Rep_1999_c_16_13
Type: pfam
Location: 18177 - 20051 (-)
Type: pfam
Location: 18177 - 20051 (-)
Gene ID: Rep_1999_c_16_14
Type: CAZyme
Location: 20223 - 21539 (+)
Type: CAZyme
Location: 20223 - 21539 (+)
Gene ID: Rep_1999_c_16_15
Type: TC
Location: 21876 - 23246 (-)
Type: TC
Location: 21876 - 23246 (-)
Gene ID: Rep_1999_c_16_16
Type: TC
Location: 23861 - 25231 (-)
Type: TC
Location: 23861 - 25231 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum sp902477755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.