Cluster: Rep_1999_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1999
- CGC Family ID: CGCFAM_06330
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1999_c_8 | Rep_1999_c_8_20 | 20556 | 22172 | + | GH26 |
| pfam | Rep_1999_c_8 | Rep_1999_c_8_21 | 22295 | 22747 | - | HSP20 |
| NULL(UNKNOWN) | Rep_1999_c_8 | Rep_1999_c_8_22 | 22967 | 23728 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1999_c_8 | Rep_1999_c_8_23 | 24245 | 25729 | + | 2.A.114.1.2 |
| TC | Rep_1999_c_8 | Rep_1999_c_8_24 | 26221 | 27705 | + | 2.A.114.1.2 |
Gene ID: Rep_1999_c_8_20
Type: CAZyme
Location: 20556 - 22172 (+)
Type: CAZyme
Location: 20556 - 22172 (+)
Gene ID: Rep_1999_c_8_21
Type: pfam
Location: 22295 - 22747 (-)
Type: pfam
Location: 22295 - 22747 (-)
Gene ID: Rep_1999_c_8_22
Type:
Location: 22967 - 23728 (-)
Type:
Location: 22967 - 23728 (-)
Gene ID: Rep_1999_c_8_23
Type: TC
Location: 24245 - 25729 (+)
Type: TC
Location: 24245 - 25729 (+)
Gene ID: Rep_1999_c_8_24
Type: TC
Location: 26221 - 27705 (+)
Type: TC
Location: 26221 - 27705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum sp902477755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.